Awesome GitHub RepositoriesKnowledge Graph Builders

gbrain is an agent framework and retrieval-augmented generation system that combines a durable task queue, a git-synced vector store, and a knowledge graph engine. It provides a foundation for building AI agents that interact with structured knowledge bases using the Model Context Protocol. The system synchronizes markdown files from a git repository into a database for high-performance semantic retrieval and creates typed edges between data pages by extracting entity references and wikilinks. It uses a database-backed queue to execute persistent background jobs and tool loops, ensuring relia

This project is a recommendation system framework designed for building, evaluating, and operationalizing personalized item suggestion engines. It provides a comprehensive toolkit for implementing collaborative filtering and content-based algorithms, supported by an end-to-end machine learning pipeline for preparing datasets and deploying predictive models. The framework distinguishes itself through the integration of knowledge graphs to provide richer context for recommendations and the use of industry-specific patterns to accelerate system deployment. It also includes a specialized model ev

Memori is an AI agent memory middleware platform designed to provide persistent, context-aware recall for language models. It functions as a non-intrusive layer that intercepts outbound model requests to automatically capture interaction history and execution traces, ensuring that agents maintain continuity across sessions without requiring modifications to existing application logic. The platform distinguishes itself through a dual-model storage architecture that maintains information as both structured relational primitives for precise fact retrieval and rolling narrative summaries for situ

Hermes-webui is a self-hosted AI orchestrator and web interface for managing autonomous agents. It serves as a multi-provider gateway that connects cloud and local large language models, providing a central hub to execute scheduled background jobs, run shell commands, and manage agent memory on private hardware. The system distinguishes itself through a persistent memory manager that utilizes knowledge graphs and markdown files for long-term context across sessions. It features a model context protocol host for extending agent capabilities with standardized tools and supports the orchestratio

OpenMetadata is an enterprise data catalog, metadata platform, and governance suite that functions as a knowledge graph for data assets. It serves as an AI-ready metadata layer, providing governed context and organizational memory to large language model agents via the Model Context Protocol. The platform distinguishes itself by capturing institutional knowledge, linking conversations, decisions, and remediation notes directly to data assets to preserve tribal knowledge. It integrates AI agents to automate metadata governance, such as suggesting descriptions and identifying sensitive data thr

Blinko is a personal knowledge management system and an LLM-powered knowledge base that enables users to capture and organize thoughts through a bi-directional knowledge graph. It functions as a RAG-enabled note-taking application and a self-hosted Markdown editor, allowing for the creation of permanent documentation and fleeting notes. The project distinguishes itself by integrating retrieval-augmented generation to provide conversational querying and AI-powered analysis of private document libraries. It supports both cloud-based and local AI model integration, enabling users to perform sema

This project is a structured catalog of server-side development questions and advanced Node.js concepts designed for senior-level interview preparation. It focuses on backend engineering topics including architecture, performance, and system design, while also covering Node.js internals, async patterns, and production debugging. The resource organizes interview topics into a navigable knowledge graph of interconnected concepts and subtopics, with explicit cross-references linking related ideas together. Content is presented through a question-driven learning path that guides the learner from

This project is a scientific agent framework and workflow orchestrator designed to extend large language models with specialized tools for genomic, chemical, and biological research. It provides a system for planning research hypotheses and executing automated workflows by integrating scientific databases with dynamic code execution. The framework includes a cheminformatics modeling suite for predicting molecular bioactivity and performing virtual screening, alongside a bioinformatics analysis toolkit for processing genomic sequences and single-cell data. It also features an academic document

KAG is a graph-augmented retrieval augmented generation system and knowledge graph engine. It functions as a framework that integrates large language models with graph retrieval and numerical calculation to resolve natural language queries. The system creates unified knowledge representations by aligning unstructured data and expert rules through semantic mapping. It maintains mutual indexing between graph structures and original text blocks to ensure that reasoning processes remain linked to verifiable source data. The project provides capabilities for semantic information integration, grap

This project is a comprehensive Lisp AI implementation library that provides reference implementations for various artificial intelligence paradigms and symbolic algorithms. It functions as a multi-purpose toolkit containing a logic programming engine, a natural language processing suite, and a symbolic mathematics toolkit. The library is distinguished by its diverse architectural frameworks, including a Prolog-style execution engine that uses unification and goal-driven backtracking, and a system for simulating human decision-making through expert system shells and certainty factors. It also

Dendron is a markdown knowledge management system designed for organizing linked files into a hierarchical personal knowledge base. It functions as a git-backed note manager that stores data as plaintext markdown files to ensure data persistence and ownership. The system distinguishes itself through schema-based organization, which applies structural templates and autocomplete hints to maintain consistency across large sets of documents. It also provides bi-directional linking and an interactive graph view to visualize relationships between notes, alongside a static site generator that export

QASystemOnMedicalKG is a medical knowledge graph question answering system designed to retrieve disease-centered information from a structured data store. It functions as both a constructor for building medical knowledge graphs and a retrieval system that extracts answers regarding symptoms, causes, and treatments. The system employs a pipeline that converts unstructured medical web data into a graph database using dictionary-based entity segmentation. It utilizes query-based intent classification to parse natural language inputs and maps these queries to specific nodes and edges within the g

This repository contains the comprehensive documentation for a code editor focused on AI-assisted software development and remote development workflows. It covers the implementation of AI agents and language models used for autonomous code generation, large-scale refactoring, and task iteration. The project is distinguished by its deep integration of autonomous AI agents capable of web navigation, application logic validation, and orchestrating multi-step development processes. It provides specialized frameworks for tailoring AI behavior through custom instructions, model context protocols, a

This project is a curated repository of technical learning materials and a personal knowledge base. It consists of version-controlled Markdown summaries covering software architecture, engineering literature, research papers, and professional talks. The collection functions as a digital garden, using bidirectional linking and cross-references to map relationships between technical concepts. Content is distilled from various sources, including technical books, conference talks, and foundational computer science papers, into concise summaries to facilitate recall and study. The system is organ

Cocoindex is an incremental data processing engine that builds and maintains live indexes for AI agents, with a core focus on codebase indexing and knowledge graph extraction. The engine uses a function-graph execution model where user-defined Python functions are composed into a directed acyclic graph, and it processes data incrementally so only changed source records or code paths are re-computed, avoiding full recomputation at any scale. It supports automatic schema inference from transformation pipeline type annotations and provides full data lineage tracing, tagging every output record wi

Org-roam is an Emacs-based note-taking system that builds a bidirectional network of plain-text notes, functioning as a personal knowledge base manager. It maintains both forward and backlink references in a SQLite database, automatically updated on file save, and uses persistent unique identifiers for notes instead of file paths to enable stable links across renames and moves. The system integrates directly with Emacs through custom interactive commands and hooks that access the database and buffer state, and it generates static graphs of note interconnections using Graphviz to reveal relati

Obsidian.nvim is a Neovim plugin that brings Obsidian vault management and markdown note-taking directly into the editor. It models each Obsidian vault as a local directory with configurable settings, note paths, and attachment folders, bridging vault operations through Neovim's Lua API and user-defined keybindings. The plugin handles core vault workflows including note creation with template insertion, daily notes management with configurable date formats, and navigation by following wiki-style and markdown links. It provides asynchronous full-text and filename search across vault notes usin

QOwnNotes is a desktop note editor that stores each note as a plain-text Markdown file on the local filesystem, avoiding proprietary formats and enabling direct file access. It functions as a Nextcloud Notes client, syncing notes and metadata with Nextcloud or ownCloud servers through a companion API service for versioning and sharing. The application also integrates with AI providers and exposes a local MCP server for external agents to search and fetch notes, and includes a companion browser extension for capturing web content, bookmarks, and screenshots. The editor distinguishes itself thr

CRI-O is an open-source container runtime that implements the Kubernetes Container Runtime Interface (CRI) to manage container images, pods, and containers on cluster nodes using OCI-compatible runtimes. It serves as a node-level container manager that handles image pulling, container lifecycle, and resource monitoring for Kubernetes clusters, running containers according to the Open Container Initiative specifications. The runtime distinguishes itself through live configuration reloading that applies changes to runtime definitions, registry mirrors, and TLS certificates without restarting th