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snakemake avatar

snakemake/snakemake

0
View on GitHub↗
2,817 stars·653 forks·Python·MIT·15 viewssnakemake.github.io↗

Snakemake

This is the development home of the workflow management system Snakemake. For general information, see

Features

  • Data Pipelines - Manages scalable and reproducible data analysis workflows.
  • Workflow Automation - Python-based workflow management for reproducible pipelines.
  • General Purpose Orchestration - Python-based system for reproducible and scalable data analyses.

Star history

Star history chart for snakemake/snakemakeStar history chart for snakemake/snakemake

How this analysis was created: This summary and feature list are AI-generated from collected project material and can contain mistakes. Stars, license and language are imported from GitHub. Inclusion does not mean that we have tested or audited this project. Check the source documentation for any feature you depend on. Learn more on our About page.

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Projects sharing features with Snakemake

These projects share indexed features with Snakemake. Shared tags can include platform or build tooling; verify the primary use case before treating a result as a replacement.
  • argoproj/argo-workflowsargoproj avatar

    argoproj/argo-workflows

    16,466View on GitHub↗

    Argo Workflows is a container-native workflow engine that functions as a Kubernetes custom resource controller. It orchestrates complex sequences of containerized tasks by executing them as directed acyclic graphs, allowing for dependency management and parallel processing within a cluster. The system extends the native Kubernetes control plane to manage the full lifecycle of automated processes, from initial triggering to final resource cleanup. The platform distinguishes itself through its controller-pattern reconciliation, which continuously monitors workflow states to align them with desi

    Goairflowargoargo-workflows
    View on GitHub↗16,466
  • activepieces/activepiecesactivepieces avatar

    activepieces/activepieces

    20,887View on GitHub↗

    Activepieces is an open-source, self-hosted workflow automation platform designed to connect third-party applications through modular triggers and actions. It provides a low-code integration framework that allows users to build, manage, and execute complex business logic sequences within isolated, sandboxed environments. The platform distinguishes itself through its focus on embeddability and enterprise-grade security. It features an embedded automation builder that can be integrated into external applications via iframes, supported by comprehensive identity and access management tools such a

    TypeScriptai-agentai-agent-toolsai-agents
    View on GitHub↗20,887
  • apache/oozieapache avatar

    apache/oozie

    729View on GitHub↗

    Mirror of Apache Oozie

    Java
    View on GitHub↗729
  • couler-proj/coulercouler-proj avatar

    couler-proj/couler

    944View on GitHub↗

    Unified Interface for Constructing and Managing Workflows on different workflow engines, such as Argo Workflows, Tekton Pipelines, and Apache Airflow.

    Python
    View on GitHub↗944
Compare all 30 related projects→

Frequently asked questions

What does snakemake/snakemake do?

This is the development home of the workflow management system Snakemake. For general information, see

What are the main features of snakemake/snakemake?

The main features of snakemake/snakemake are: Data Pipelines, Workflow Automation, General Purpose Orchestration.

Which projects share features with snakemake/snakemake?

Projects with overlapping indexed features include: couler-proj/couler — Unified Interface for Constructing and Managing Workflows on different workflow engines, such as Argo Workflows,… dagster-io/dagster — Dagster is a data orchestration platform designed to manage the entire lifecycle of data assets through declarative… apache/oozie — Mirror of Apache Oozie. argoproj/argo-workflows — Argo Workflows is a container-native workflow engine that functions as a Kubernetes custom resource controller. It… activepieces/activepieces — Activepieces is an open-source, self-hosted workflow automation platform designed to connect third-party applications… huginn/huginn — Huginn is a self-hosted automation platform that functions as an event-driven workflow engine. It allows users to…