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SeqWare avatar

SeqWare/seqware

0
View on GitHub↗
30 stars·17 forks·Java·GPL-3.0·10 viewsseqware.io↗

Seqware

This is the SeqWare Project's main repo.

Features

  • Workflow Managers - Hadoop-based system for genomics analysis in the cloud.

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Frequently asked questions

What does seqware/seqware do?

This is the SeqWare Project's main repo.

What are the main features of seqware/seqware?

The main features of seqware/seqware are: Workflow Managers.

What are some open-source alternatives to seqware/seqware?

Open-source alternatives to seqware/seqware include: broadinstitute/cromwell — Scientific workflow engine designed for simplicity & scalability. Trivially transition between one off use cases to… broadinstitute/wdl — Workflow Description Language - Specification and Implementations. cgat-developers/ruffus — CGAT-ruffus is a lightweight python module for running computational pipelines. common-workflow-language/common-workflow-language — Repository for the CWL standards. Use https://cwl.discourse.group/ for support 😊. insitro/redun — Yet another redundant workflow engine. nextflow-io/nextflow — Nextflow is a dataflow workflow engine and distributed computing framework used to build and execute data-intensive…

Open-source alternatives to Seqware

Similar open-source projects, ranked by how many features they share with Seqware.
  • broadinstitute/wdlbroadinstitute avatar

    broadinstitute/wdl

    27View on GitHub↗

    Workflow Description Language - Specification and Implementations

    Java
    View on GitHub↗27
  • cgat-developers/ruffuscgat-developers avatar

    cgat-developers/ruffus

    175View on GitHub↗

    CGAT-ruffus is a lightweight python module for running computational pipelines

    Python
    View on GitHub↗175
  • common-workflow-language/common-workflow-languagecommon-workflow-language avatar

    common-workflow-language/common-workflow-language

    1,480View on GitHub↗

    Repository for the CWL standards. Use https://cwl.discourse.group/ for support 😊

    Common Workflow Language
    View on GitHub↗1,480
  • broadinstitute/cromwellbroadinstitute avatar

    broadinstitute/cromwell

    1,069View on GitHub↗

    Scientific workflow engine designed for simplicity & scalability. Trivially transition between one off use cases to massive scale production environments

    Scala
    View on GitHub↗1,069
See all 9 alternatives to Seqware
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