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cgat-developers/ruffus

0
View on GitHub↗
175 stars·34 forks·Python·MIT·6 views

Ruffus

CGAT-ruffus is a lightweight python module for running computational pipelines

Features

  • Workflow Managers - Python library for building computational pipelines.

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Open-source alternatives to Ruffus

Similar open-source projects, ranked by how many features they share with Ruffus.
  • broadinstitute/wdlbroadinstitute avatar

    broadinstitute/wdl

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    Workflow Description Language - Specification and Implementations

    Java
    View on GitHub↗27
  • common-workflow-language/common-workflow-languagecommon-workflow-language avatar

    common-workflow-language/common-workflow-language

    1,480View on GitHub↗

    Repository for the CWL standards. Use https://cwl.discourse.group/ for support 😊

    Common Workflow Language
    View on GitHub↗1,480
  • insitro/reduninsitro avatar

    insitro/redun

    591View on GitHub↗

    Yet another redundant workflow engine

    Python
    View on GitHub↗591
  • broadinstitute/cromwellbroadinstitute avatar

    broadinstitute/cromwell

    1,069View on GitHub↗

    Scientific workflow engine designed for simplicity & scalability. Trivially transition between one off use cases to massive scale production environments

    Scala
    View on GitHub↗1,069
See all 9 alternatives to Ruffus→

Frequently asked questions

What does cgat-developers/ruffus do?

CGAT-ruffus is a lightweight python module for running computational pipelines

What are the main features of cgat-developers/ruffus?

The main features of cgat-developers/ruffus are: Workflow Managers.

What are some open-source alternatives to cgat-developers/ruffus?

Open-source alternatives to cgat-developers/ruffus include: broadinstitute/cromwell — Scientific workflow engine designed for simplicity & scalability. Trivially transition between one off use cases to… broadinstitute/wdl — Workflow Description Language - Specification and Implementations. common-workflow-language/common-workflow-language — Repository for the CWL standards. Use https://cwl.discourse.group/ for support 😊. insitro/redun — Yet another redundant workflow engine. nextflow-io/nextflow — Nextflow is a dataflow workflow engine and distributed computing framework used to build and execute data-intensive… pcingola/bigdatascript — BigDataScript: Scirpting language for big data.