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Generic but comprehensive pipeline for prokaryotic genome annotation and interrogation with interactive reports and shiny app.
The main features of fmalmeida/bacannot are: Analysis Pipelines.
Projects with overlapping indexed features include: bodenmillergroup/imcworkflow — Overview repository on IMC data analysis. cellprofiler/cellprofiler — An open-source application for biological image analysis. cellprofiler/cellprofiler-analyst — Open-source software for exploring and analyzing large, high-dimensional image-derived data. chapmanb/bcbio-nextgen — Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis. danifranco/biapy — Open source Python library for building bioimage analysis pipelines. bactopia/bactopia — A flexible pipeline for complete analysis of bacterial genomes.
An open-source application for biological image analysis
Open-source software for exploring and analyzing large, high-dimensional image-derived data.
A flexible pipeline for complete analysis of bacterial genomes
