awesome-repositories.com
Blog
MCP
awesome-repositories.com

Discover the best open-source repositories with AI-powered search.

ExploreCurated searchesOpen-source alternativesSelf-hosted softwareBlogSitemap
ProjectMCP serverAboutHow we rankPress
LegalPrivacyTerms
© 2026 Bringes Technology SRL·VAT RO45896025·hello@awesome-repositories.com
·
fmalmeida avatar

fmalmeida/bacannot

0
View on GitHub↗
107 stars·12 forks·Nextflow·GPL-3.0·8 viewsbacannot.readthedocs.io/en/latest↗

Bacannot

Generic but comprehensive pipeline for prokaryotic genome annotation and interrogation with interactive reports and shiny app.

Features

  • Analysis Pipelines - Bacterial annotation pipeline with graphical reporting.

Star history

Star history chart for fmalmeida/bacannotStar history chart for fmalmeida/bacannot

AI search

Explore more awesome repositories

Describe what you need in plain English — the AI ranks thousands of curated open-source projects by relevance.

Start searching with AI

Open-source alternatives to Bacannot

Similar open-source projects, ranked by how many features they share with Bacannot.
  • bodenmillergroup/imcworkflowB

    BodenmillerGroup/IMCWorkflow

    0View on GitHub↗
    View on GitHub↗0
  • cellprofiler/cellprofilerCellProfiler avatar

    CellProfiler/CellProfiler

    1,121View on GitHub↗

    An open-source application for biological image analysis

    Python
    View on GitHub↗1,121
  • cellprofiler/cellprofiler-analystC

    CellProfiler/CellProfiler-Analyst

    0View on GitHub↗
    View on GitHub↗0
  • bactopia/bactopiabactopia avatar

    bactopia/bactopia

    518View on GitHub↗

    A flexible pipeline for complete analysis of bacterial genomes

    Nextflow
    View on GitHub↗518
See all 16 alternatives to Bacannot→

Frequently asked questions

What does fmalmeida/bacannot do?

Generic but comprehensive pipeline for prokaryotic genome annotation and interrogation with interactive reports and shiny app.

What are the main features of fmalmeida/bacannot?

The main features of fmalmeida/bacannot are: Analysis Pipelines.

What are some open-source alternatives to fmalmeida/bacannot?

Open-source alternatives to fmalmeida/bacannot include: bodenmillergroup/imcworkflow. cellprofiler/cellprofiler — An open-source application for biological image analysis. cellprofiler/cellprofiler-analyst. chapmanb/bcbio-nextgen — Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis. danifranco/biapy. bactopia/bactopia — A flexible pipeline for complete analysis of bacterial genomes.