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CellProfiler avatar

CellProfiler/CellProfiler-Analyst

0
View on GitHub↗
cellprofileranalyst.org↗

CellProfiler Analyst

Open-source software for exploring and analyzing large, high-dimensional image-derived data.

Features

  • Analysis Pipelines - Tool for exploring and classifying image analysis results.

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171 stars·76 forks·Python·10 views

Star history

Star history chart for cellprofiler/cellprofiler-analystStar history chart for cellprofiler/cellprofiler-analyst

How this analysis was created: This summary and feature list are AI-generated from collected project material and can contain mistakes. Stars, license and language are imported from GitHub. Inclusion does not mean that we have tested or audited this project. Check the source documentation for any feature you depend on. Learn more on our About page.

Frequently asked questions

What does cellprofiler/cellprofiler-analyst do?

Open-source software for exploring and analyzing large, high-dimensional image-derived data.

What are the main features of cellprofiler/cellprofiler-analyst?

The main features of cellprofiler/cellprofiler-analyst are: Analysis Pipelines.

Which projects share features with cellprofiler/cellprofiler-analyst?

Projects with overlapping indexed features include: bodenmillergroup/imcworkflow — Overview repository on IMC data analysis. cellprofiler/cellprofiler — An open-source application for biological image analysis. chapmanb/bcbio-nextgen — Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis. danifranco/biapy — Open source Python library for building bioimage analysis pipelines. fmalmeida/bacannot — Generic but comprehensive pipeline for prokaryotic genome annotation and interrogation with interactive reports and… bactopia/bactopia — A flexible pipeline for complete analysis of bacterial genomes.

Projects sharing features with CellProfiler Analyst

These projects share indexed features with CellProfiler Analyst. Shared tags can include platform or build tooling; verify the primary use case before treating a result as a replacement.
  • bodenmillergroup/imcworkflowBodenmillerGroup avatar

    BodenmillerGroup/IMCWorkflow

    10View on GitHub↗

    Overview repository on IMC data analysis

    View on GitHub↗10
  • cellprofiler/cellprofilerCellProfiler avatar

    CellProfiler/CellProfiler

    1,121View on GitHub↗

    An open-source application for biological image analysis

    Python
    View on GitHub↗1,121
  • chapmanb/bcbio-nextgenchapmanb avatar

    chapmanb/bcbio-nextgen

    1,030View on GitHub↗

    Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis

    Python
    View on GitHub↗1,030
  • bactopia/bactopiabactopia avatar

    bactopia/bactopia

    518View on GitHub↗

    A flexible pipeline for complete analysis of bacterial genomes

    Nextflow
    View on GitHub↗518
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