How this analysis was created: This summary and feature list were written by an AI model that read the project's README and public documentation pages. Each feature links to the documentation it came from; stars, license and language come straight from the GitHub API. The model does not read the source code, and the analysis is refreshed when the project is re-analysed. Learn more on our About page.
An open-source application for biological image analysis
A flexible pipeline for complete analysis of bacterial genomes
Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis
The main features of chapmanb/bcbio-nextgen are: Analysis Pipelines.
Open-source alternatives to chapmanb/bcbio-nextgen include: bodenmillergroup/imcworkflow. cellprofiler/cellprofiler — An open-source application for biological image analysis. cellprofiler/cellprofiler-analyst. danifranco/biapy. fmalmeida/bacannot — Generic but comprehensive pipeline for prokaryotic genome annotation and interrogation with interactive reports and… bactopia/bactopia — A flexible pipeline for complete analysis of bacterial genomes.