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ADAM is a genomics analysis platform with specialized file formats built using Apache Avro, Apache Spark, and Apache Parquet. Apache 2 licensed.
Breeze is/was a numerical processing library for Scala.
Bioinformatics for the Scala programming language
The main features of bioscala/bioscala are: Machine Learning Frameworks, Data Analysis and Visualization.
Open-source alternatives to bioscala/bioscala include: bigdatagenomics/adam — ADAM is a genomics analysis platform with specialized file formats built using Apache Avro, Apache Spark, and Apache… twitter/algebird — Abstract Algebra for Scala. biddata/bidmach — CPU and GPU-accelerated Machine Learning Library. biddata/bidmat — A CPU and GPU-accelerated matrix library for data mining. scalanlp/breeze — Breeze is/was a numerical processing library for Scala. twitter/scalding — A Scala API for Cascading.
