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bigdatagenomics avatar

bigdatagenomics/adam

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1,053 stars·313 forks·Scala·Apache-2.0·5 views

Adam

ADAM is a genomics analysis platform with specialized file formats built using Apache Avro, Apache Spark, and Apache Parquet. Apache 2 licensed.

Features

  • Machine Learning and Analytics - Platform for large-scale genomics analysis.
  • Machine Learning Frameworks - Genomics processing engine built on Spark and Parquet.
  • Data Analysis and Visualization - Genomic data processing engine using Spark and Parquet.
  • Domain Specific Processing - Tools for analyzing genomics data.

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Frequently asked questions

What does bigdatagenomics/adam do?

ADAM is a genomics analysis platform with specialized file formats built using Apache Avro, Apache Spark, and Apache Parquet. Apache 2 licensed.

What are the main features of bigdatagenomics/adam?

The main features of bigdatagenomics/adam are: Machine Learning and Analytics, Machine Learning Frameworks, Data Analysis and Visualization, Domain Specific Processing.

What are some open-source alternatives to bigdatagenomics/adam?

Open-source alternatives to bigdatagenomics/adam include: bioscala/bioscala — Bioinformatics for the Scala programming language. scalanlp/breeze — Breeze is/was a numerical processing library for Scala. biddata/bidmach — CPU and GPU-accelerated Machine Learning Library. biddata/bidmat — A CPU and GPU-accelerated matrix library for data mining. oryxproject/oryx — Oryx 2: Lambda architecture on Apache Spark, Apache Kafka for real-time large scale machine learning. twitter/algebird — Abstract Algebra for Scala.

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