# scverse/scvi-tools

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_How this analysis was created: the description and tags below were written by an AI model that read this project's README and public documentation pages; stars, license and language come straight from the GitHub API. The model does not read the source code._

1,643 stars · 461 forks · Python · BSD-3-Clause

## Links

- GitHub: https://github.com/scverse/scvi-tools
- Homepage: http://scvi-tools.org/
- awesome-repositories: https://awesome-repositories.com/repository/scverse-scvi-tools.md

## Topics

`cite-seq` `deep-generative-model` `deep-learning` `human-cell-atlas` `scrna-seq` `scverse` `single-cell-genomics` `single-cell-rna-seq` `variational-autoencoder` `variational-bayes`

## Description

Deep probabilistic analysis of single-cell and spatial omics data

## Tags

### Part of an Awesome List

- [Multi-Omics Integration](https://awesome-repositories.com/f/awesome-lists/data/multi-omics-integration.md) — Analyzes joint scRNA, scATAC, and multiomic data.
- [Spatial Transcriptomics](https://awesome-repositories.com/f/awesome-lists/data/spatial-transcriptomics.md) — Latent variable model for spatial deconvolution.