30 open-source projects similar to bowang-lab/medsam, ranked by how many features they have in common. Compare stars, activity and what each one does to find the best MedSAM alternative.
TotalSegmentator is a medical image segmentation tool and AI-driven organ segmenter designed to isolate anatomical structures from CT scans. It functions as a deep learning anatomy parser and quantitative radiomics analyzer, providing a framework for identifying diverse body tissues and bones to create precise anatomical masks. The system distinguishes itself through a comprehensive medical analysis suite that includes patient biometric estimation for demographics such as age, sex, weight, and height. It further provides specialized clinical index calculations and modality and phase classific
This project is a biomedical image segmentation framework and PyTorch computer vision library. It provides a deep learning pipeline for isolating specific anatomical structures within medical imagery using pixel-level binary classification. The system utilizes an encoder-decoder neural architecture combined with attention-based feature refinement to highlight relevant anatomical regions and suppress background noise. The toolkit covers a full training workflow, including stochastic data augmentation for biomedical datasets, hyperparameter optimization, and model persistence for restoring pre
MONAI is a PyTorch-based deep learning framework and library specifically designed for healthcare imaging. It provides a suite of domain-specific neural network architectures, specialized loss functions, and preprocessing pipelines tailored for analyzing multi-dimensional medical data. The project distinguishes itself through a decentralized federated learning system that allows models to learn from datasets across multiple institutions without exchanging raw patient images. It also features AI-assisted medical image annotation tools and a standardized model bundling system to ensure consiste
This is a structured deep learning curriculum for programmers, delivered as a collection of Jupyter notebooks. It teaches the fundamentals of training neural networks for computer vision, natural language processing, tabular data analysis, and collaborative filtering using PyTorch and the fastai library. The course is designed to be hands-on, guiding learners from building a training loop from scratch to fine-tuning pretrained models for a variety of practical tasks. The curriculum distinguishes itself by covering the full lifecycle of a deep learning project, from data preparation and augmen
This repository is a comprehensive educational program and deep learning framework designed to teach practical deep learning using PyTorch through notebooks and code examples. It serves as a high-level library for building, training, and deploying neural networks, acting as a model training orchestrator that coordinates PyTorch models, optimizers, and loss functions. The project provides specialized toolkits for computer vision, natural language processing, and tabular data preprocessing. It distinguishes itself through advanced training controls such as discriminative learning rates, a two-w
BiRefNet is a PyTorch image segmentation framework designed for high-precision binary mask generation. It functions as a bilateral image segmentation model used to isolate foreground objects from complex backgrounds, as well as a specialized tool for camouflaged object detection and industrial defect detection. The project is designed for export to the ONNX format, which facilitates cross-platform deployment and inference. It supports custom model fine-tuning on user-provided image and mask datasets to adapt the model for specialized professional use cases. The system covers high-resolution
FastSAM is an image segmentation framework that uses convolutional neural networks to isolate visual elements and generate masks for detectable objects within images. It provides a system for both automatic all-object segmentation and promptable image segmentation. The project utilizes an inference-optimized architecture to reduce computational overhead, enabling faster mask generation and real-time visual analysis. It supports the creation of precise masks through various prompt inputs, including points, bounding boxes, and text descriptions. The framework covers broader computer vision cap
Stable-audio-tools is a toolkit for training and deploying latent diffusion models for high-fidelity audio synthesis. It provides a framework for generating audio by iteratively refining noise within a compressed latent space, using specialized encoders to preserve temporal and spectral features of the audio signal. The project features a system for adapting pre-trained audio checkpoints to new datasets through modular initialization and configuration files. It includes utilities for weight extraction and inference model export, which remove training metadata and optimizer states to create li
nnU-Net is a PyTorch-based deep learning framework for the supervised semantic segmentation of 2D and 3D biomedical images. It functions as an automated medical imaging pipeline that generates predicted masks and labels from clinical images. The system distinguishes itself by using dataset-driven auto-configuration to automatically select the optimal network architecture, preprocessing steps, and training hyperparameters based on the specific properties of the input medical dataset. The framework covers a broad range of capabilities including medical dataset preparation, intensity normalizat
This project is a comprehensive instructional resource and course for building neural networks using PyTorch. It covers the fundamental building blocks of deep learning, including tensor manipulation, automatic differentiation, and the construction of modular neural network components. The repository serves as a technical guide for several specialized domains. It provides implementation details for computer vision tasks such as image classification, object detection, and semantic segmentation, as well as natural language processing workflows involving transformers, recurrent networks, and gen
Segment Geospatial is a Python toolkit for isolating geographic features in remote sensing imagery using the Segment Anything Model. It functions as a remote sensing image processor that converts map tiles into georeferenced formats to generate segmentation masks from satellite data. The system enables the extraction of geographic objects through automatic mask generation or manual prompts, such as text descriptions, bounding boxes, and interactive markers. It supports timeseries imagery segmentation to track or identify objects across sequences of images over different dates and provides a g
This project serves as a specialized platform for clinical medical imaging research, providing a collection of educational notebooks and standardized tools for deep learning. It functions as a framework for building and training neural networks tailored to the unique geometric and intensity properties of medical image data, supporting tasks such as segmentation, classification, and registration. The platform distinguishes itself through its focus on end-to-end research workflows, offering modular templates that standardize data preprocessing, model training, and inference. It includes capabil
MobileSAM is a lightweight image segmenter and promptable vision model designed for fast object isolation on resource-constrained hardware. It functions as an automatic image masking tool capable of detecting and isolating distinct objects across an entire image without manual input. The system enables prompt-based object masking using coordinate points or bounding boxes to generate precise masks. It also supports all-object image segmentation through object-aware prompt sampling to identify every distinct object in a scene. To facilitate mobile and edge deployment, the model is compatible w
MagicQuill is a suite of interactive tools for image segmentation, diffusion-based editing, layered composition, and prompt-guided visual synthesis. It functions as a diffusion model image editor and a layered visual composition tool, enabling the addition, removal, and recoloring of image elements through a combination of sketches and text prompts. The system features a prompt-guided image generator that predicts editing instructions by analyzing user drawings to automatically populate text prompts. It allows for visual style control by swapping generative model weights to shift outputs betw
sam-hq is a collection of pre-trained vision foundation models and adapters designed for high-quality image segmentation, multimodal feature extraction, and depth estimation. It provides a zero-shot vision model capable of performing segmentation and classification across diverse domains without requiring task-specific training. The project features a high-quality image segmentation tool based on the Segment Anything Model that generates precise masks from spatial prompts. It includes a multimodal feature extractor to generate high-dimensional vector embeddings from both image and text inputs
MMSegmentation is an open-source semantic segmentation toolbox built on PyTorch that provides a modular, configurable framework for building, training, evaluating, and deploying segmentation models. At its core, it offers a config-driven pipeline that assembles training, evaluation, and inference workflows by parsing hierarchical configuration files, with a modular component registry that enables plug-and-play composition of neural network modules, optimizers, datasets, and metrics. The framework supports the full model lifecycle through a unified runner interface that controls training, testi
PaddleX is a PaddlePaddle-based framework for building, deploying, and fine-tuning AI model pipelines, with pre-built support for computer vision, OCR, document analysis, and time series tasks. It offers a toolkit of ready-to-use pipelines for image classification, object detection, segmentation, and pose estimation, alongside an end-to-end OCR document analysis pipeline that extracts text, tables, formulas, and layout information. The platform also includes a dedicated time series forecasting pipeline for analyzing historical data to detect anomalies, classify patterns, and predict future val
Yolact is a computer vision framework and real-time instance segmentation model. It utilizes a fully convolutional neural network to detect objects and generate pixel-level masks for images and video feeds. The system employs prototypical mask generation to create global mask prototypes that are linearly combined for instance-specific results. It incorporates deformable convolutional layers and deformable region-of-interest pooling to adapt spatial sampling to the irregular shapes of objects. The framework covers the full model development lifecycle, including training on custom datasets, ac
This project is a TensorFlow and Keras implementation of the Mask R-CNN architecture. It provides a framework for performing simultaneous object detection and instance segmentation, transforming raw images into segmented masks and bounding boxes for individual object identification. The toolset enables custom computer vision training through fine-tuning pre-trained weights and integrating user-provided datasets. It includes capabilities for distributed GPU training to accelerate the optimization of large vision models. The framework covers model evaluation using standard precision metrics an
This project is a PyTorch implementation of 3D residual networks designed for video action recognition. It provides a spatiotemporal architecture that analyzes both spatial frames and temporal motion to classify human activities within video clips. The system includes a distributed model training framework to accelerate learning across multiple compute nodes. It supports the deployment and fine-tuning of pre-trained model weights, allowing the adaptation of existing networks to specific new datasets. The codebase covers the full pipeline for spatiotemporal learning, including video dataset p
This project is a self-supervised contrastive learning framework designed to train deep learning models to learn visual representations from images without using human-provided labels. It provides a system for developing pretrained visual representation models that can be adapted for downstream computer vision tasks. The framework includes tools for semi-supervised image classification, which combines large unlabeled datasets with small labeled sets to improve accuracy. It also features a linear probe evaluation tool to assess the quality of learned image features by training a simple linear
DeepKE is a knowledge extraction toolkit and framework designed to transform unstructured text into structured knowledge graphs. It provides a pipeline for identifying and classifying named entities, semantic relations, and events, converting raw datasets into structured triples. The project utilizes large language models as tool callers through a standardized context protocol to drive automated data extraction processes. It supports schema-driven extraction across multiple domains and bilingual text, employing joint entity and relation extraction to identify components in a single structured
This project is a comprehensive machine learning educational resource and tutorial series delivered as a collection of interactive Jupyter Notebooks. It provides practical Python implementations for the end-to-end machine learning lifecycle, covering supervised and unsupervised learning, deep learning, and reinforcement learning. The resource distinguishes itself by providing detailed implementation guides for complex architectures, including transformers, generative adversarial networks, and convolutional neural networks. It also features specialized courseware for developing reinforcement l
mmaction2 is a PyTorch video understanding toolbox designed for training and evaluating deep learning models. It serves as a framework for action recognition, temporal localization, and spatio-temporal action detection, providing specialized tools for both pixel-based video analysis and skeleton-based action recognition. The project distinguishes itself through a modular architecture featuring registry-based component discovery and hierarchical, config-driven model assembly. It supports multi-modal feature fusion, integrating RGB frames, optical flow, and audio, and includes capabilities for
This project is a collection of structured study notes and notebooks serving as an educational resource for deep learning and neural network fundamentals. It provides a technical reference for implementing machine learning theory, covering everything from basic network design to the construction of advanced architectures. The material specifically focuses on the implementation of convolutional neural networks for computer vision and sequence models for natural language processing. It includes detailed guidance on building object detection systems, face recognition, and speech transcription mo
This project is a deep learning framework designed for end-to-end speech-to-text transcription. It utilizes the WaveNet neural network architecture to process spoken audio input and generate written text transcripts, leveraging connectionist temporal classification to map variable-length audio sequences to character-level outputs. The system distinguishes itself through a comprehensive training pipeline that supports distributed execution across multiple graphics processing units. It includes specialized utilities for audio data augmentation and the transformation of raw audio files into opti
F5-TTS is a text-to-speech system that utilizes a flow matching engine and diffusion transformers to generate fluent synthetic speech. It functions as a multilingual speech synthesizer and neural training framework, providing tools for voice cloning and high-performance inference serving. The project distinguishes itself through a voice cloning toolkit capable of mimicking specific speaker characteristics and tones from reference audio clips. It supports cross-lingual generation, allowing for the synthesis of audio across various global languages or the mixing of multiple languages within a s
This project is a deep learning library built for single-image super-resolution and visual enhancement. It provides a framework for training and deploying neural network architectures designed to reconstruct high-resolution images from low-resolution sources, effectively recovering fine details and removing artifacts caused by downscaling or compression. The library distinguishes itself through the implementation of generative adversarial networks and residual block architectures, which work together to improve the realism and clarity of upscaled outputs. It supports training through both pix
This project is a Python bio-imaging toolkit and analysis suite designed for processing and analyzing microscopy and medical images. It provides a collection of tools for image quantification, medical image segmentation, and general bio-imaging workflows. The suite includes specialized capabilities for quantifying biological data, such as measuring neuron branching complexity via Sholl analysis, calculating particle size distributions, and tracking wound area in scratch assays. It also features a medical image segmentation library that implements U-Net architectures for isolating anatomical s
This project is a plugin for OBS Studio that uses neural networks to isolate subjects from backgrounds in real-time video streams. It functions as an AI video segmentation tool that predicts portrait masks to create virtual green-screen effects without the need for physical hardware. The software includes a real-time depth estimation filter that identifies scene depth to produce a blurred background while keeping the foreground subject in focus. It also provides low-light video enhancement to improve visibility and visual quality for portrait video captured in poorly lit environments. The pl