Blazing-Fast Bioinformatic Operations on Python DataFrames
Python interface to access reference genome features (such as genes, transcripts, and exons) from Ensembl
Die Hauptfunktionen von openvax/pyensembl sind: Python Bioinformatics Modules.
Open-Source-Alternativen zu openvax/pyensembl sind unter anderem: arq5x/cyvcf — A fast Python library for VCF files leveraging Cython for speed. biodatageeks/polars-bio — Blazing-Fast Bioinformatic Operations on Python DataFrames. brentp/cruzdb — python access to UCSC genomes database. brentp/cyvcf2 — cython + htslib == fast VCF and BCF processing. cokelaer/bioservices — Access to Biological Web Services from Python. daler/pybedtools — Python wrapper -- and more -- for BEDTools (bioinformatics tools for "genome arithmetic").